CAMK2B

Chr 7

calcium/calmodulin dependent protein kinase II beta

Also known as: CAM2, CAMK2, CAMKB, CaMKIIbeta, MRD54

The product of this gene belongs to the serine/threonine protein kinase family and to the Ca(2+)/calmodulin-dependent protein kinase subfamily. Calcium signaling is crucial for several aspects of plasticity at glutamatergic synapses. In mammalian cells, the enzyme is composed of four different chains: alpha, beta, gamma, and delta. The product of this gene is a beta chain. It is possible that distinct isoforms of this chain have different cellular localizations and interact differently with calmodulin. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2014]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtIntellectual developmental disorder, autosomal dominant 54

Clinical highlights

Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
39
Pubs (1 yr)
P/LP submissions
P/LP missense
0.36
LOEUF
LOF*
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Missense constrained — critical functional residues
LoF Constraint?
0.36LOEUF
pLI 0.739
Z-score 4.65
OE 0.20 (0.120.36)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
4.07Z-score
OE missense 0.42 (0.370.48)
166 obs / 393.1 exp
Constrained

Highly missense-constrained (top ~0.1%)

Observed / Expected Ratios?
LoF OE?0.20 (0.120.36)
00.351.4
Missense OE?0.42 (0.370.48)
00.61.4
Synonymous OE?0.98
01.21.6
LoF obs/exp: 8 / 39.6Missense obs/exp: 166 / 393.1Syn Z: 0.22

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

CAMK2B · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.