Ensembl is currently experiencing issues

The Ensembl REST API is temporarily unavailable. Some gene data (transcript details, protein domains) may be incomplete. Other data sources are unaffected.

You can check Ensembl's status at status.ensembl.org

C9ORF47

Chr 9

chromosome 9 open reading frame 47

Also known as: C9orf108, bA791O21.3

The protein encoded by this gene functions as a receptor for sphingosine 1-phosphate (S1P), a bioactive lysophospholipid that mediates cell proliferation and suppression of apoptosis. No disease associations have been established for mutations in C9ORF47. The gene appears tolerant to loss-of-function mutations based on population genetic data.

ResearchSummary from UniProt
LOEUF 1.77
Clinical SummaryC9ORF47
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
Some data sources returned errors (1)

ensembl: Error: Ensembl fetch failed: 400 for https://rest.ensembl.org/lookup/symbol/homo_sapiens/C9ORF47?content-type=application/json&expand=1

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.77LOEUF
pLI 0.000
Z-score 0.02
OE 0.99 (0.541.77)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.35Z-score
OE missense 1.10 (0.941.28)
119 obs / 108.6 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.99 (0.541.77)
00.351.4
Missense OE1.10 (0.941.28)
00.61.4
Synonymous OE1.00
01.21.6
LoF obs/exp: 6 / 6.0Missense obs/exp: 119 / 108.6Syn Z: 0.00

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

C9ORF47 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →