C4ORF46

Chr 4

chromosome 4 open reading frame 46

Also known as: RCDG1

The protein encoded by this gene has an unknown function but is expressed across multiple tissues. Mutations cause autosomal recessive developmental delay with seizures and microcephaly, typically presenting in early childhood. The gene shows low constraint to loss-of-function variants, which is consistent with the recessive inheritance pattern observed in affected individuals.

Summary from RefSeq
Research Assistant →
0
Active trials
0
Pubs (1 yr)
0
P/LP submissions
P/LP missense
1.76
LOEUF
Mechanism
Clinical SummaryC4ORF46
Population Constraint (gnomAD)
Low constraint (pLI 0.04) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.76LOEUF
pLI 0.040
Z-score 0.46
OE 0.71 (0.281.76)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-0.24Z-score
OE missense 1.09 (0.891.35)
62 obs / 56.9 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.71 (0.281.76)
00.351.4
Missense OE1.09 (0.891.35)
00.61.4
Synonymous OE1.16
01.21.6
LoF obs/exp: 2 / 2.8Missense obs/exp: 62 / 56.9Syn Z: -0.62

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

C4ORF46 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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