C4A

Chr 6

complement C4A (Chido/Rodgers blood group)

Also known as: C4, C4A2, C4A3, C4A4, C4A6, C4AD, C4S, CO4

This gene encodes the acidic form of complement factor 4, part of the classical activation pathway. The protein is expressed as a single chain precursor which is proteolytically cleaved into a trimer of alpha, beta, and gamma chains prior to secretion. The trimer provides a surface for interaction between the antigen-antibody complex and other complement components. The alpha chain is cleaved to release C4 anaphylatoxin, an antimicrobial peptide and a mediator of local inflammation. Deficiency of this protein is associated with systemic lupus erythematosus and type I diabetes mellitus. This gene localizes to the major histocompatibility complex (MHC) class III region on chromosome 6. Varying haplotypes of this gene cluster exist, such that individuals may have 1, 2, or 3 copies of this gene. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2014]

GeneReviewsResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtComplement component 4A deficiency
UniProtSystemic lupus erythematosus
0
Active trials
113
Pubs (1 yr)
P/LP submissions
P/LP missense
1.45
LOEUF
Mechanism
📖
GeneReview available — C4A
Authoritative clinical overview · Recommended first read
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Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.45LOEUF
pLI 0.000
Z-score 0.14
OE 0.97 (0.661.45)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
1.92Z-score
OE missense 0.63 (0.540.72)
130 obs / 207.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.97 (0.661.45)
00.351.4
Missense OE?0.63 (0.540.72)
00.61.4
Synonymous OE?0.81
01.21.6
LoF obs/exp: 17 / 17.6Missense obs/exp: 130 / 207.9Syn Z: 1.41

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

C4A · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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