C17ORF50
Chr 17chromosome 17 open reading frame 50
Clinical Summary— C17ORF50
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Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
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ClinVar Variants
6 Pathogenic / Likely Pathogenic· 10 VUS of 16 total submissions
Population Genetics & Constraint
gnomAD v4 — loss-of-function & missense intolerance
Tolerant — LoF & missense variants common in population
LoF Constraint
1.90LOEUF
pLI 0.000
Z-score -0.74
OE 1.32 (0.75–1.90)
Highly tolerant — LoF variants common in population
Missense Constraint
-0.31Z-score
OE missense 1.10 (0.93–1.30)
92 obs / 83.9 exp
Tolerant to missense variation
Observed / Expected Ratios
LoF OE1.32 (0.75–1.90)
0≤0.351.4
Missense OE1.10 (0.93–1.30)
0≤0.61.4
Synonymous OE1.05
0≤1.21.6
LoF obs/exp: 8 / 6.0Missense obs/exp: 92 / 83.9Syn Z: -0.26
ClinVar Variant Classifications
16 submitted variants in ClinVar
Classification Summary
Pathogenic6
VUS10
6
Pathogenic
10
VUS
Curated Variants Distribution
Classified variants from ClinVar · 5 ACMG categories
| Classification | LoF | Missense + Inframe | Non-coding | Synonymous | Total |
|---|---|---|---|---|---|
Pathogenic | 0 | 0 | 6 | 0 | 6 |
Likely Pathogenic | 0 | 0 | 0 | 0 | 0 |
VUS | 0 | 7 | 3 | 0 | 10 |
Likely Benign | 0 | 0 | 0 | 0 | 0 |
Benign | 0 | 0 | 0 | 0 | 0 |
| Total | 0 | 7 | 9 | 0 | 16 |
LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly
View in ClinVar →C17ORF50 · protein map & ClinVar variants
Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.
External Resources
Links to major genomics databases and tools
Clinical Trials
Active and recruiting trials from ClinicalTrials.gov
No active trials found for this gene.
Search ClinicalTrials.gov →Clinical Literature
Landmark / reviewRecent case evidence
Full-Text Mentions
NLP-detected gene mentions in article bodies · via PubTator3
Arsenic exposure in early pregnancy alters genome-wide DNA methylation in cord blood, particularly in boys
Broberg K et al.·J Dev Orig Health Dis
2014
Analysis of lncRNA-miRNA-mRNA Interactions in Hyper-proliferative Human Pulmonary Arterial Smooth Muscle Cells
Chinnappan M et al.·Sci Rep
2019
A novel enhancer regulates MGMT expression and promotes temozolomide resistance in glioblastoma
Chen X et al.·Nat Commun
2018
Top 3 full-text resultsSearch PubTator3 ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
No open access results found
Top 5 resultsSearch Europe PMC ↗
External Resources
Links to major genomics databases and tools