BNIP3

Chr 10

BCL2 interacting protein 3

Also known as: HABON, NIP3

This gene is encodes a mitochondrial protein that contains a BH3 domain and acts as a pro-apoptotic factor. The encoded protein interacts with anti-apoptotic proteins, including the E1B 19 kDa protein and Bcl2. This gene is silenced in tumors by DNA methylation. [provided by RefSeq, Dec 2014]

ResearchGenerating clinical summary…
1
Active trials
392
Pubs (1 yr)
P/LP submissions
P/LP missense
1.46
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.46LOEUF
pLI 0.000
Z-score 0.53
OE 0.82 (0.481.46)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.83Z-score
OE missense 0.78 (0.660.93)
90 obs / 114.9 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.82 (0.481.46)
00.351.4
Missense OE?0.78 (0.660.93)
00.61.4
Synonymous OE?0.94
01.21.6
LoF obs/exp: 8 / 9.8Missense obs/exp: 90 / 114.9Syn Z: 0.30

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

BNIP3 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.