BLTP1

Chr 4AR

bridge-like lipid transfer protein family member 1

Also known as: ALKKUCS, FSA, KIAA1109, Tweek

This gene is located on the long arm of chromosome 4 in a region that is associated with susceptibility to celiac disease. The encoded protein is similar to a Chinese hamster protein that is associated with spermatocyte and adipocyte differentiation. The C-terminus of the protein is also similar to a Caenorhabditis elegans protein that plays a role in lipid storage. In mammals, this protein is thought to function in the regulation of epithelial growth and differentiation, and in tumor development. [provided by RefSeq, Oct 2009]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Alkuraya-Kucinskas syndromeMIM #617822
AR

Clinical highlights

Gene-disease validity (ClinGen)
Alkuraya-Kucinskas syndrome · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
6
Pubs (1 yr)
P/LP submissions
P/LP missense
0.41
LOEUF
Mechanism

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Missense constrained — critical functional residues
LoF Constraint?
0.41LOEUF
pLI 0.000
Z-score 9.56
OE 0.34 (0.290.41)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
6.00Z-score
OE missense 0.67 (0.640.69)
1707 obs / 2561.8 exp
Constrained

Extremely missense-constrained (top ~0.01%)

Observed / Expected Ratios?
LoF OE?0.34 (0.290.41)
00.351.4
Missense OE?0.67 (0.640.69)
00.61.4
Synonymous OE?0.94
01.21.6
LoF obs/exp: 84 / 245.8Missense obs/exp: 1707 / 2561.8Syn Z: 1.47

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

BLTP1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →