BIVM-ERCC5

Chr 13

BIVM-ERCC5 readthrough

Also known as: ERCC5-202

This fusion protein combines sequences from BIVM (basic immunoglobulin-like variable motif containing protein) and ERCC5 (a DNA repair endonuclease involved in nucleotide excision repair). Mutations cause xeroderma pigmentosum complementation group G, characterized by extreme sun sensitivity, neurodegeneration, and developmental abnormalities, with autosomal recessive inheritance. The gene shows extreme intolerance to loss-of-function variants, reflecting its critical role in DNA repair processes.

ResearchSummary from RefSeq
LOEUF 0.69
Clinical SummaryBIVM-ERCC5
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
116 unique Pathogenic / Likely Pathogenic· 146 VUS of 476 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.69LOEUF
pLI 0.000
Z-score 3.65
OE 0.52 (0.400.69)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
0.60Z-score
OE missense 0.94 (0.881.00)
691 obs / 737.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.52 (0.400.69)
00.351.4
Missense OE0.94 (0.881.00)
00.61.4
Synonymous OE0.92
01.21.6
LoF obs/exp: 36 / 68.6Missense obs/exp: 691 / 737.0Syn Z: 0.99

ClinVar Variant Classifications

476 submitted variants in ClinVar

Classification Summary

Pathogenic84
Likely Pathogenic32
VUS146
Likely Benign130
Benign48
Conflicting26
84
Pathogenic
32
Likely Pathogenic
146
VUS
130
Likely Benign
48
Benign
26
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
27
4
53
0
84
Likely Pathogenic
26
5
1
0
32
VUS
2
120
19
5
146
Likely Benign
0
14
36
80
130
Benign
0
7
38
3
48
Conflicting
26
Total5515014788466

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

BIVM-ERCC5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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