BEX1

Chr X

brain expressed X-linked 1

Also known as: BEX2, HBEX2, HGR74-h

Enables signaling adaptor activity and transcription coactivator binding activity. Involved in positive regulation of transcription by RNA polymerase II. Part of transcription regulator complex. [provided by Alliance of Genome Resources, Jun 2026]

OMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
14
Pubs (1 yr)
P/LP submissions
P/LP missense
1.22
LOEUF
GOF
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
1.22LOEUF
pLI 0.543
Z-score 1.41
OE 0.00 (0.001.22)
Moderately constrained

Highly tolerant — LoF variants common in population

Missense Constraint?
0.37Z-score
OE missense 0.85 (0.661.10)
42 obs / 49.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.00 (0.001.22)
00.351.4
Missense OE?0.85 (0.661.10)
00.61.4
Synonymous OE?1.29
01.21.6
LoF obs/exp: 0 / 2.3Missense obs/exp: 42 / 49.4Syn Z: -0.92

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

BEX1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →