BCL10

Chr 1AR

BCL10 immune signaling adaptor

Also known as: CARMEN, CIPER, CLAP, IMD37, c-E10, mE10

This gene was identified by its translocation in a case of mucosa-associated lymphoid tissue (MALT) lymphoma. The protein encoded by this gene contains a caspase recruitment domain (CARD), and has been shown to induce apoptosis and to activate NF-kappaB. This protein is reported to interact with other CARD domain containing proteins including CARD9, 10, 11 and 14, which are thought to function as upstream regulators in NF-kappaB signaling. This protein is found to form a complex with MALT1, a protein encoded by another gene known to be translocated in MALT lymphoma. MALT1 and this protein are thought to synergize in the activation of NF-kappaB, and the deregulation of either of them may contribute to the same pathogenetic process that leads to the malignancy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2016]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

?Immunodeficiency 37MIM #616098
AR
{Lymphoma, follicular, somatic}MIM #605027
{Male germ cell tumor, somatic}MIM #273300
{Mesothelioma, somatic}MIM #156240
{Sezary syndrome, somatic}
Lymphoma, MALT, somaticMIM #137245
UniProtLymphoma, mucosa-associated lymphoid type

Clinical highlights

Gene-disease validity (ClinGen)
immunodeficiency 37 · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
46
Pubs (1 yr)
P/LP submissions
P/LP missense
0.73
LOEUF
GOF
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.73LOEUF
pLI 0.337
Z-score 2.09
OE 0.23 (0.090.73)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
1.39Z-score
OE missense 0.65 (0.540.78)
80 obs / 123.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.23 (0.090.73)
00.351.4
Missense OE?0.65 (0.540.78)
00.61.4
Synonymous OE?1.16
01.21.6
LoF obs/exp: 2 / 8.6Missense obs/exp: 80 / 123.5Syn Z: -0.82

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

BCL10 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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