BBS7

Chr 4AR

Bardet-Biedl syndrome 7

Also known as: BBS2L1

The protein encoded by this gene is a component of the BBSome complex that functions as a coat complex required for sorting specific membrane proteins to primary cilia and promoting ciliogenesis through Rab8-mediated vesicle trafficking. Mutations cause Bardet-Biedl syndrome, an autosomal recessive ciliopathy characterized by childhood-onset obesity, retinal degeneration, polydactyly, and nephropathy. This gene has extremely low constraint against loss-of-function variants (pLI near zero), and mutations in BBS7 are thought to play a minor role compared to chaperonin-like BBS genes in disease development.

Summary from RefSeq, OMIM, UniProt
Research Assistant →

Primary Disease Associations & Inheritance

Bardet-Biedl syndrome 7MIM #615984
AR
Bardet-Biedl syndrome 7MIM #615984
AR
1
Active trials
10
Pubs (1 yr)
185
P/LP submissions
7%
P/LP missense
0.73
LOEUF
LOF
Mechanism· G2P
Clinical SummaryBBS7
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Gene-Disease Validity (ClinGen)
BBS7-related ciliopathy · ARDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
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ClinVar Variants
129 unique Pathogenic / Likely Pathogenic· 258 VUS of 700 total submissions
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Clinical Trials
1 active or recruiting trial — potential therapeutic options may be available
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GeneReview available — BBS7
Authoritative clinical overview · Recommended first read
Open GeneReview ↗

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.73LOEUF
pLI 0.000
Z-score 2.88
OE 0.51 (0.350.73)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
1.23Z-score
OE missense 0.82 (0.750.90)
307 obs / 374.1 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.51 (0.350.73)
00.351.4
Missense OE0.82 (0.750.90)
00.61.4
Synonymous OE0.83
01.21.6
LoF obs/exp: 20 / 39.6Missense obs/exp: 307 / 374.1Syn Z: 1.55

ClinVar Variant Classifications

700 submitted variants in ClinVar

Classification Summary

Pathogenic61
Likely Pathogenic68
VUS258
Likely Benign285
Benign7
Conflicting7
61
Pathogenic
68
Likely Pathogenic
258
VUS
285
Likely Benign
7
Benign
7
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
26
5
30
0
61
Likely Pathogenic
47
4
17
0
68
VUS
3
220
30
5
258
Likely Benign
0
1
148
136
285
Benign
0
0
7
0
7
Conflicting
7
Total76230232141686

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

BBS7 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 5 results · since 2015Search PubMed ↗