BBS2

Chr 16AR

Bardet-Biedl syndrome 2

The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the guanosyl exchange factor (GEF) for Rab8 and then the Rab8-GTP localizes to the cilium and promotes docking and fusion of carrier vesicles to the base of the ciliary membrane. The BBSome complex, together with the LTZL1, controls SMO ciliary trafficking and contributes to the sonic hedgehog (SHH) pathway regulation. Required for proper BBSome complex assembly and its ciliary localization

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Bardet-Biedl syndrome 2MIM #615981
AR
Bardet-Biedl syndrome 2MIM #615981
AR
Retinitis pigmentosa 74MIM #616562
AR

Clinical highlights

Gene-disease validity (ClinGen)
BBS2-related ciliopathy · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
18
Pubs (1 yr)
P/LP submissions
P/LP missense
1.07
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

ncbi: Error: NCBI fetch failed: 429 https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.07LOEUF
pLI 0.000
Z-score 1.22
OE 0.79 (0.591.07)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.87Z-score
OE missense 0.88 (0.800.96)
351 obs / 400.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.79 (0.591.07)
00.351.4
Missense OE?0.88 (0.800.96)
00.61.4
Synonymous OE?0.97
01.21.6
LoF obs/exp: 31 / 39.3Missense obs/exp: 351 / 400.0Syn Z: 0.24

ClinVar

No ClinVar data available.

Protein Context — Lollipop Plot

BBS2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.