B9D1

Chr 17AR

B9 domain containing 1

Also known as: B9, EPPB9, JBTS27, MKS9, MKSR-1, MKSR1

This gene encodes a B9 domain-containing protein, one of several that are involved in ciliogenesis. Alterations in expression of this gene have been found in a family with Meckel syndrome. Meckel syndrome has been associated with at least six different genes. This gene is located within the Smith-Magenis syndrome region on chromosome 17. [provided by RefSeq, Mar 2016]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

?Meckel syndrome 9MIM #614209
AR
Joubert syndrome 27MIM #617120
AR

Clinical highlights

Gene-disease validity (ClinGen)
ciliopathy · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
6
Pubs (1 yr)
P/LP submissions
P/LP missense
0.95
LOEUF
LOF
Mechanism· G2P
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.95LOEUF
pLI 0.003
Z-score 1.69
OE 0.48 (0.260.95)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.10Z-score
OE missense 0.97 (0.841.13)
121 obs / 124.2 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.48 (0.260.95)
00.351.4
Missense OE?0.97 (0.841.13)
00.61.4
Synonymous OE?1.11
01.21.6
LoF obs/exp: 6 / 12.4Missense obs/exp: 121 / 124.2Syn Z: -0.58

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

B9D1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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