ATXN3

Chr 14ADMulti

ataxin 3

Also known as: AT3, ATX3, JOS, MJD, MJD1, SCA3

Machado-Joseph disease, also known as spinocerebellar ataxia-3, is an autosomal dominant neurologic disorder. The protein encoded by this gene contains (CAG)n repeats in the coding region, and the expansion of these repeats from the normal 12-44 to 52-86 is one cause of Machado-Joseph disease. There is a negative correlation between the age of onset and CAG repeat numbers. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2016]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

{Parkinson disease, late-onset, susceptibility to}MIM #168600
ADMulti
Machado-Joseph diseaseMIM #109150
AD
UniProtSpinocerebellar ataxia 3

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
76
Pubs (1 yr)
P/LP submissions
P/LP missense
0.49
LOEUF
Multiple*
Mechanism· predicted
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GeneReview available — ATXN3
Authoritative clinical overview · Recommended first read
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.49LOEUF
pLI 0.106
Z-score 3.53
OE 0.26 (0.150.49)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.35Z-score
OE missense 0.72 (0.630.83)
136 obs / 188.0 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.26 (0.150.49)
00.351.4
Missense OE?0.72 (0.630.83)
00.61.4
Synonymous OE?0.81
01.21.6
LoF obs/exp: 7 / 26.7Missense obs/exp: 136 / 188.0Syn Z: 1.21

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ATXN3 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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