ATP2A3

Chr 17

ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3

Also known as: SERCA3

This gene encodes one of the SERCA Ca(2+)-ATPases, which are intracellular pumps located in the sarcoplasmic or endoplasmic reticula of muscle cells. This enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen, and is involved in calcium sequestration associated with muscular excitation and contraction. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…
0
Active trials
23
Pubs (1 yr)
P/LP submissions
P/LP missense
0.66
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.66LOEUF
pLI 0.000
Z-score 3.51
OE 0.46 (0.330.66)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
1.83Z-score
OE missense 0.80 (0.740.86)
537 obs / 670.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.46 (0.330.66)
00.351.4
Missense OE?0.80 (0.740.86)
00.61.4
Synonymous OE?1.19
01.21.6
LoF obs/exp: 23 / 49.7Missense obs/exp: 537 / 670.5Syn Z: -2.53

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ATP2A3 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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