ARPC4-TTLL3

Chr 3

ARPC4-TTLL3 readthrough

This naturally occurring read-through transcript produces a fusion protein combining sequences from ARPC4 (actin-related protein 2/3 complex subunit 4, involved in actin nucleation and cytoskeletal regulation) and TTLL3 (tubulin tyrosine ligase-like protein 3, involved in microtubule post-translational modifications). The gene shows extreme constraint against loss-of-function variation, but no definitive disease associations have been established for mutations in this read-through transcript.

ResearchSummary from RefSeq
LOEUF 1.08
Clinical SummaryARPC4-TTLL3
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
20 unique Pathogenic / Likely Pathogenic· 167 VUS of 200 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.08LOEUF
pLI 0.000
Z-score 1.21
OE 0.77 (0.551.08)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
1.00Z-score
OE missense 0.86 (0.780.94)
334 obs / 389.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.77 (0.551.08)
00.351.4
Missense OE0.86 (0.780.94)
00.61.4
Synonymous OE0.85
01.21.6
LoF obs/exp: 24 / 31.3Missense obs/exp: 334 / 389.4Syn Z: 1.45

ClinVar Variant Classifications

200 submitted variants in ClinVar

Classification Summary

Pathogenic20
VUS167
Likely Benign8
Benign2
Conflicting1
20
Pathogenic
167
VUS
8
Likely Benign
2
Benign
1
Conflicting

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
20
0
20
Likely Pathogenic
0
0
0
0
0
VUS
1
151
15
0
167
Likely Benign
0
3
3
2
8
Benign
0
0
1
1
2
Conflicting
1
Total1154393198

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

ARPC4-TTLL3 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
Open Research Assistant →
Key Publications
Landmark & review papers · by relevance
PubMed
Top 1 results · since 2015Search PubMed ↗
Recent Gene-Specific Literature
Gene in title · MEDLINE · newest first
Europe PMC

No open access results found