ARHGDIB

Chr 12

Rho GDP dissociation inhibitor beta

Also known as: D4, GDIA2, GDID4, LYGDI, Ly-GDI, RAP1GN1, RhoGDI2

ARHGDIB encodes a GDP dissociation inhibitor that regulates Rho family GTPases by inhibiting GDP dissociation and subsequent GTP binding, thereby controlling actin cytoskeleton reorganization. The gene shows low constraint to loss-of-function variation (pLI 0.0006, LOEUF 1.3), and no established Mendelian diseases have been definitively associated with ARHGDIB mutations in current databases.

Summary from RefSeq, UniProt
Research Assistant →
0
Active trials
10
Pubs (1 yr)
39
P/LP submissions
0%
P/LP missense
1.30
LOEUF
Mechanism
Clinical SummaryARHGDIB
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
39 unique Pathogenic / Likely Pathogenic· 26 VUS of 72 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.30LOEUF
pLI 0.001
Z-score 0.95
OE 0.66 (0.361.30)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
0.04Z-score
OE missense 0.99 (0.851.16)
111 obs / 112.3 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios
LoF OE0.66 (0.361.30)
00.351.4
Missense OE0.99 (0.851.16)
00.61.4
Synonymous OE1.44
01.21.6
LoF obs/exp: 6 / 9.1Missense obs/exp: 111 / 112.3Syn Z: -2.39

ClinVar Variant Classifications

72 submitted variants in ClinVar

Classification Summary

Pathogenic37
Likely Pathogenic2
VUS26
37
Pathogenic
2
Likely Pathogenic
26
VUS

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
37
0
37
Likely Pathogenic
0
0
2
0
2
VUS
0
22
4
0
26
Likely Benign
0
0
0
0
0
Benign
0
0
0
0
0
Total02243065

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

ARHGDIB · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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