AP1S2

Chr XXLR

adaptor related protein complex 1 subunit sigma 2

Also known as: DC22, MRX59, MRXS21, MRXS5, MRXSF, PGS, SIGMA1B

Adaptor protein complex 1 is found at the cytoplasmic face of coated vesicles located at the Golgi complex, where it mediates both the recruitment of clathrin to the membrane and the recognition of sorting signals within the cytosolic tails of transmembrane receptors. This complex is a heterotetramer composed of two large, one medium, and one small adaptin subunit. The protein encoded by this gene serves as the small subunit of this complex and is a member of the adaptin protein family. Transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2013]

OMIMResearchGenerating clinical summary…
LOFmechanismXLRLOEUF 0.451 OMIM phenotype
Clinical SummaryAP1S2
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Gene-Disease Validity (ClinGen)
X-linked syndromic complex neurodevelopmental disorder · XLDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Moderately constrained gene (pLI 0.87) — some intolerance to loss-of-function variants.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.45LOEUF
pLI 0.867
Z-score 2.38
OE 0.00 (0.000.45)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
2.01Z-score
OE missense 0.26 (0.170.40)
15 obs / 58.2 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.00 (0.000.45)
00.351.4
Missense OE?0.26 (0.170.40)
00.61.4
Synonymous OE?1.12
01.21.6
LoF obs/exp: 0 / 6.6Missense obs/exp: 15 / 58.2Syn Z: -0.42

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

AP1S2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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