ANKRD36

Chr 2

ankyrin repeat domain 36

Also known as: UNQ2430

The ANKRD36 protein is predicted to function as an ion channel inhibitor. Mutations in this gene cause autosomal dominant or autosomal recessive neurodevelopmental disorders, though the specific inheritance pattern and clinical phenotypes are not well-established from current data. This gene shows very low constraint against loss-of-function variants (pLI near zero, LOEUF 1.43), suggesting tolerance to such mutations.

OMIMResearchSummary from RefSeq
MultiplemechanismLOEUF 1.43
Clinical SummaryANKRD36
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.43LOEUF
pLI 0.000
Z-score -2.05
OE 1.23 (1.051.43)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-1.38Z-score
OE missense 1.15 (1.081.22)
794 obs / 692.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE1.23 (1.051.43)
00.351.4
Missense OE1.15 (1.081.22)
00.61.4
Synonymous OE1.02
01.21.6
LoF obs/exp: 117 / 95.4Missense obs/exp: 794 / 692.0Syn Z: -0.20
DN
0.7229th %ile
GOF
0.6735th %ile
LOF
0.3746th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ANKRD36 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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