ANKRD36

Chr 2

ankyrin repeat domain 36

Also known as: UNQ2430

Predicted to enable ion channel inhibitor activity. [provided by Alliance of Genome Resources, Jul 2025]

0
Active trials
4
Pubs (1 yr)
31
P/LP submissions
3%
P/LP missense
1.43
LOEUF
Multiple*
Mechanism· predicted
Clinical SummaryANKRD36
Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
📋
ClinVar Variants
29 unique Pathogenic / Likely Pathogenic· 18 VUS of 121 total submissions

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
1.43LOEUF
pLI 0.000
Z-score -2.05
OE 1.23 (1.051.43)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint
-1.38Z-score
OE missense 1.15 (1.081.22)
794 obs / 692.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE1.23 (1.051.43)
00.351.4
Missense OE1.15 (1.081.22)
00.61.4
Synonymous OE1.02
01.21.6
LoF obs/exp: 117 / 95.4Missense obs/exp: 794 / 692.0Syn Z: -0.20
DN
0.7229th %ile
GOF
0.6735th %ile
LOF
0.3746th %ile

This gene has evidence for multiple mechanisms of pathogenicity (dominant-negative and gain-of-function). Both the Badonyi & Marsh prediction and the broader genomic evidence point to dominant-negative as the predominant mechanism. Different variants in this gene may act through different mechanisms — interpret in context of the specific variant.

DNprediction above median
GOFprediction above median

Note: In-silico variant effect predictors (SIFT, PolyPhen, REVEL, CADD) may underestimate pathogenicity of missense variants in genes with GOF or DN mechanisms. Consider functional evidence and clinical context.

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312.

ClinVar Variant Classifications

121 submitted variants in ClinVar

Classification Summary

Pathogenic19
Likely Pathogenic10
VUS18
Likely Benign19
Benign2
19
Pathogenic
10
Likely Pathogenic
18
VUS
19
Likely Benign
2
Benign

Curated Variants Distribution

Classified variants from ClinVar · 5 ACMG categories

ClassificationLoFMissense + InframeNon-codingSynonymousTotal
Pathogenic
0
0
19
0
19
Likely Pathogenic
1
1
8
0
10
VUS
0
0
18
0
18
Likely Benign
0
4
4
11
19
Benign
1
0
1
0
2
Total25501168

LoF = frameshift, stop gained/lost, canonical splice · Counts from ClinVar esearch · Updated hourly

View in ClinVar →

Protein Context — Lollipop Plot

ANKRD36 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →
Clinical Literature
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