ALOX5

Chr 10AD

arachidonate 5-lipoxygenase

Also known as: 5-LO, 5-LOX, 5LPG, LOG5

This gene encodes a member of the lipoxygenase gene family and plays a dual role in the synthesis of leukotrienes from arachidonic acid. The encoded protein, which is expressed specifically in bone marrow-derived cells, catalyzes the conversion of arachidonic acid to 5(S)-hydroperoxy-6-trans-8,11,14-cis-eicosatetraenoic acid, and further to the allylic epoxide 5(S)-trans-7,9-trans-11,14-cis-eicosatetrenoic acid (leukotriene A4). Leukotrienes are important mediators of a number of inflammatory and allergic conditions. Mutations in the promoter region of this gene lead to a diminished response to antileukotriene drugs used in the treatment of asthma and may also be associated with atherosclerosis and several cancers. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2012]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

{Asthma, diminished response to antileukotriene treatment in}MIM #600807
AD
{Atherosclerosis, susceptibility to}
1
Active trials
185
Pubs (1 yr)
P/LP submissions
P/LP missense
0.64
LOEUF
Multiple*
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.64LOEUF
pLI 0.000
Z-score 3.38
OE 0.42 (0.290.64)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
1.09Z-score
OE missense 0.85 (0.780.93)
363 obs / 426.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.42 (0.290.64)
00.351.4
Missense OE?0.85 (0.780.93)
00.61.4
Synonymous OE?1.02
01.21.6
LoF obs/exp: 17 / 40.1Missense obs/exp: 363 / 426.5Syn Z: -0.23

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ALOX5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.