AGO2

Chr 8AD

argonaute RISC catalytic component 2

Also known as: CASC7, EIF2C2, LESKRES, LINC00980, PPD, Q10

This protein is essential for RNA-mediated gene silencing, functioning as the catalytic component of the RNA-induced silencing complex (RISC) that uses microRNAs and small interfering RNAs to regulate gene expression through mRNA cleavage or translational repression. Mutations cause Lessel-Kreienkamp syndrome, an autosomal dominant neurodevelopmental disorder. The gene is highly constrained against loss-of-function mutations (pLI >0.99, LOEUF 0.106), indicating that complete protein loss is likely incompatible with normal development.

OMIMResearchSummary from RefSeq, OMIM, UniProt
LOFmechanismADLOEUF 0.111 OMIM phenotype
Clinical SummaryAGO2
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Gene-Disease Validity (ClinGen)
Lessel-Kreienkamp syndrome · ADDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Highly constrained gene — heterozygous loss-of-function variants are very rare in the population (pLI 1.00). One damaged copy is likely sufficient to cause disease.

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Dual constrained — LoF & missense intolerant
LoF Constraint
0.11LOEUF
pLI 1.000
Z-score 6.07
OE 0.02 (0.010.11)
Highly constrained

Among the most LoF-intolerant genes (~top 3%)

Missense Constraint
6.06Z-score
OE missense 0.29 (0.250.33)
162 obs / 568.4 exp
Constrained

Extremely missense-constrained (top ~0.01%)

Observed / Expected Ratios
LoF OE0.02 (0.010.11)
00.351.4
Missense OE0.29 (0.250.33)
00.61.4
Synonymous OE0.93
01.21.6
LoF obs/exp: 1 / 44.9Missense obs/exp: 162 / 568.4Syn Z: 0.90
DN
0.2997th %ile
GOF
0.2696th %ile
LOF
0.76top 10%

The highest-scoring mechanism for this gene is loss-of-function (haploinsufficiency).

LOFprediction above median · 1 literature citation · LOEUF 0.11

Literature Evidence

LOFThere was no evidence for a dominant-negative effect, indicating that the mutations most likely result in a loss of function.PMID:33199684

Predictions from Badonyi M, Marsh JA. PLoS ONE. 2024;19(8):e0307312. Mechanism ranking also informed by gnomAD constraint, ClinVar, and ClinGen data.

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

AGO2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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Clinical Literature
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