AGL

Chr 1AR

amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase

Also known as: GDE

The protein encodes glycogen debrancher enzyme, which degrades glycogen through two distinct catalytic activities: 4-alpha-glucotransferase and amylo-1,6-glucosidase. Mutations cause autosomal recessive glycogen storage disease III, with subtypes IIIa and IIIb showing variable enzymatic deficiency and clinical severity likely due to tissue-specific alternative splicing. The disease results from impaired glycogen breakdown leading to abnormal glycogen accumulation in affected tissues.

OMIMResearchSummary from RefSeq, OMIM, UniProt
LOFmechanismARLOEUF 0.802 OMIM phenotypes
Clinical SummaryAGL
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Gene-Disease Validity (ClinGen)
glycogen storage disease III · ARDefinitive

Definitive — sufficient evidence for diagnostic panels

Population Constraint (gnomAD)
Low constraint (pLI 0.00) — loss-of-function variants are relatively tolerated in the population.
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Clinical Trials
1 active or recruiting trial — potential therapeutic options may be available

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint
0.80LOEUF
pLI 0.000
Z-score 3.17
OE 0.64 (0.510.80)
Tolerant

Typical tolerance to LoF variation

Missense Constraint
-0.46Z-score
OE missense 1.05 (0.991.11)
830 obs / 793.4 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios
LoF OE0.64 (0.510.80)
00.351.4
Missense OE1.05 (0.991.11)
00.61.4
Synonymous OE1.02
01.21.6
LoF obs/exp: 57 / 89.4Missense obs/exp: 830 / 793.4Syn Z: -0.20

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

AGL · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

3D Protein StructureAlphaFold
Clinical Literature
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Full-Text Mentions
NLP-detected gene mentions in article bodies · via PubTator3
PubTator3
Top 5 full-text resultsSearch PubTator3 ↗