ADAMTSL1

Chr 9

ADAMTS like 1

Also known as: ADAMTSL-1, ADAMTSR1, C9orf94, PUNCTIN

This gene encodes a secreted protein and member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motif) family. This protein lacks the metalloproteinase and disintegrin-like domains, which are typical of the ADAMTS family, but contains other ADAMTS domains, including the thrombospondin type 1 motif. This protein may have important functions in the extracellular matrix. Alternative splicing results in multiple transcript variants encoding distinct proteins. [provided by RefSeq, Jul 2008]

OMIMResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
A dominant-negative effect is the curated mechanism (Gene2Phenotype), so a variant that simply removes the protein may not be the pathogenic class here — missense variants in functional domains often carry more weight.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
12
Pubs (1 yr)
P/LP submissions
P/LP missense
0.53
LOEUF
DN
Mechanism· G2P

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.53LOEUF
pLI 0.000
Z-score 5.24
OE 0.40 (0.310.53)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
-0.97Z-score
OE missense 1.08 (1.031.14)
1138 obs / 1049.6 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.40 (0.310.53)
00.351.4
Missense OE?1.08 (1.031.14)
00.61.4
Synonymous OE?1.22
01.21.6
LoF obs/exp: 36 / 89.5Missense obs/exp: 1138 / 1049.6Syn Z: -3.68

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ADAMTSL1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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