ACOX1

Chr 17

acyl-CoA oxidase 1

Also known as: ACOX, AOX, MITCH, PALMCOX, SCOX

The protein encoded by this gene is the first enzyme of the fatty acid beta-oxidation pathway, which catalyzes the desaturation of acyl-CoAs to 2-trans-enoyl-CoAs. It donates electrons directly to molecular oxygen, thereby producing hydrogen peroxide. Defects in this gene result in pseudoneonatal adrenoleukodystrophy, a disease that is characterized by accumulation of very long chain fatty acids. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtAdrenoleukodystrophy, pseudoneonatal
UniProtMitchell syndrome

Clinical highlights

Gene-disease validity (ClinGen)
peroxisomal acyl-CoA oxidase deficiency · ARDefinitivesufficient evidence for diagnostic panels2 gene-disease associations curated in total
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
2
Active trials
195
Pubs (1 yr)
P/LP submissions
P/LP missense
0.46
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.46LOEUF
pLI 0.062
Z-score 3.97
OE 0.26 (0.160.46)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
1.98Z-score
OE missense 0.71 (0.640.79)
258 obs / 364.5 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.26 (0.160.46)
00.351.4
Missense OE?0.71 (0.640.79)
00.61.4
Synonymous OE?0.98
01.21.6
LoF obs/exp: 9 / 34.0Missense obs/exp: 258 / 364.5Syn Z: 0.22

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ACOX1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.