ACER2

Chr 9

alkaline ceramidase 2

Also known as: ALKCDase2, ASAH3L

The sphingolipid metabolite sphingosine-1-phosphate promotes cell proliferation and survival, whereas its precursor, sphingosine, has the opposite effect. The ceramidase ACER2 hydrolyzes very long chain ceramides to generate sphingosine (Xu et al., 2006 [PubMed 16940153]).[supplied by OMIM, Jul 2010]

ResearchGenerating clinical summary…

Clinical highlights

Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Based on population constraint only.
0
Active trials
9
Pubs (1 yr)
P/LP submissions
P/LP missense
0.69
LOEUF
Multiple*
Mechanism· predicted
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.69LOEUF
pLI 0.040
Z-score 2.41
OE 0.33 (0.170.69)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
-0.37Z-score
OE missense 1.08 (0.951.23)
166 obs / 153.0 exp
Tolerant

Tolerant to missense variation

Observed / Expected Ratios?
LoF OE?0.33 (0.170.69)
00.351.4
Missense OE?1.08 (0.951.23)
00.61.4
Synonymous OE?1.09
01.21.6
LoF obs/exp: 5 / 15.1Missense obs/exp: 166 / 153.0Syn Z: -0.57

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ACER2 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →