ACBD5

Chr 10

acyl-CoA binding domain containing 5

Also known as: RDLKD

This gene encodes a member of the acyl-Coenzyme A binding protein family, known to function in the transport and distribution of long chain acyl-Coenzyme A in cells. This gene may play a role in the differentiation of megakaryocytes and formation of platelets. A related protein in yeast is involved in autophagy of peroxisomes. A mutation in this gene has been associated with autosomal dominant thrombocytopenia. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]

ResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtRetinal dystrophy with leukodystrophy

Clinical highlights

Gene-disease validity (ClinGen)
acyl-CoA binding domain containing protein 5 deficiency · ARDefinitivesufficient evidence for diagnostic panels
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype) and the gene is intolerant of it in the population — truncating, frameshift and canonical splice variants carry more prior weight here than missense.Curated gene-level mechanism — a prior for triage, not a per-variant call.
1
Active trials
9
Pubs (1 yr)
P/LP submissions
P/LP missense
0.53
LOEUF
LOF
Mechanism· G2P
Some data sources returned errors (1)

omim: Error: OMIM fetch failed: 429

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Moderate LoF intolerance
LoF Constraint?
0.53LOEUF
pLI 0.006
Z-score 3.61
OE 0.31 (0.190.53)
Moderately constrained

More LoF-intolerant than ~75% of genes

Missense Constraint?
0.87Z-score
OE missense 0.86 (0.770.95)
246 obs / 287.7 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.31 (0.190.53)
00.351.4
Missense OE?0.86 (0.770.95)
00.61.4
Synonymous OE?1.06
01.21.6
LoF obs/exp: 10 / 32.0Missense obs/exp: 246 / 287.7Syn Z: -0.46

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ACBD5 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.