ABRAXAS1

Chr 4

abraxas 1, BRCA1 A complex subunit

Also known as: ABRA1, CCDC98, FAM175A

This gene encodes a protein that binds to the C-terminal repeats of breast cancer 1 (BRCA1) through a phospho-SXXF motif. The encoded protein recruits ubiquitin interaction motif containing 1 protein to BRCA1 protein and is required for DNA damage resistance, DNA repair, and cell cycle checkpoint control. Pseudogenes of this gene are found on chromosomes 3 and 8. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2016]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

UniProtBreast cancer
4
Active trials
5
Pubs (1 yr)
P/LP submissions
P/LP missense
1.01
LOEUF
Mechanism

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
1.01LOEUF
pLI 0.000
Z-score 1.54
OE 0.63 (0.411.01)
Tolerant

Highly tolerant — LoF variants common in population

Missense Constraint?
0.04Z-score
OE missense 0.99 (0.891.11)
211 obs / 212.6 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.63 (0.411.01)
00.351.4
Missense OE?0.99 (0.891.11)
00.61.4
Synonymous OE?1.06
01.21.6
LoF obs/exp: 13 / 20.5Missense obs/exp: 211 / 212.6Syn Z: -0.43

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ABRAXAS1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.