ABCB7

Chr XX-linked

ATP binding cassette subfamily B member 7

Also known as: ABC7, ASAT, Atm1p, EST140535

The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance as well as antigen presentation. This gene encodes a half-transporter involved in the transport of heme from the mitochondria to the cytosol. With iron/sulfur cluster precursors as its substrates, this protein may play a role in metal homeostasis. Mutations in this gene have been associated with mitochondrial iron accumulation and isodicentric (X)(q13) and sideroblastic anemia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2012]

OMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

Anemia, sideroblastic, with ataxiaMIM #301310
X-linked
UniProtSpinocerebellar ataxia, X-linked 6, with or without sideroblastic anemia

Clinical highlights

Gene-disease validity (ClinGen)
mitochondrial disease · XLModerateconsider for supplementary testing
Interpreting a novel variant
This gene is strongly intolerant of loss-of-function variation in the population, so LoF variants warrant close attention. No curated mechanism annotation is available — see the mechanism card for the computational prediction and its caveats.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
17
Pubs (1 yr)
P/LP submissions
P/LP missense
0.11
LOEUF· LoF intol.
LOF
Mechanism· predicted

Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

LoF intolerant — likely haploinsufficient
LoF Constraint?
0.11LOEUF
pLI 1.000
Z-score 4.86
OE 0.00 (0.000.11)
Highly constrained

Among the most LoF-intolerant genes (~top 3%)

Missense Constraint?
2.90Z-score
OE missense 0.51 (0.450.59)
145 obs / 282.3 exp
Mild constraint

Moderately missense-constrained (top ~2.5%)

Observed / Expected Ratios?
LoF OE?0.00 (0.000.11)
00.351.4
Missense OE?0.51 (0.450.59)
00.61.4
Synonymous OE?1.01
01.21.6
LoF obs/exp: 0 / 27.5Missense obs/exp: 145 / 282.3Syn Z: -0.10

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

ABCB7 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

Search ClinicalTrials.gov →