AARS1

Chr 16ADAR

alanyl-tRNA synthetase 1

Also known as: AARS, CMT2N, DEE29, EIEE29, HDLS2, TTD8

The human alanyl-tRNA synthetase (AARS) belongs to a family of tRNA synthases, of the class II enzymes. Class II tRNA synthases evolved early in evolution and are highly conserved. This is reflected by the fact that 498 of the 968-residue polypeptide human AARS shares 41% identity witht the E.coli protein. tRNA synthases are the enzymes that interpret the RNA code and attach specific aminoacids to the tRNAs that contain the cognate trinucleotide anticodons. They consist of a catalytic domain which interacts with the amino acid acceptor-T psi C helix of the tRNA, and a second domain which interacts with the rest of the tRNA structure. [provided by RefSeq, Jul 2008]

GeneReviewsOMIMResearchGenerating clinical summary…

Primary Disease Associations & Inheritance

?Leukoencephalopathy, hereditary diffuse, with spheroids 2MIM #619661
AD
Charcot-Marie-Tooth disease, axonal, type 2NMIM #613287
AD
Developmental and epileptic encephalopathy 29MIM #616339
AR
Trichothiodystrophy 8, nonphotosensitiveMIM #619691
AR

Clinical highlights

Gene-disease validity (ClinGen)
Charcot-Marie-Tooth disease axonal type 2N · ADDefinitivesufficient evidence for diagnostic panels3 gene-disease associations curated in total
Interpreting a novel variant
Loss of function is the curated mechanism (Gene2Phenotype), though the gene is not strongly LoF-constrained in the population — weigh truncating variants against that tolerance.Curated gene-level mechanism — a prior for triage, not a per-variant call.
0
Active trials
74
Pubs (1 yr)
P/LP submissions
P/LP missense
0.62
LOEUF
LOF
Mechanism· G2P
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Population Genetics & Constraint

gnomAD v4 — loss-of-function & missense intolerance

Tolerant — LoF & missense variants common in population
LoF Constraint?
0.62LOEUF
pLI 0.000
Z-score 3.75
OE 0.43 (0.310.62)
Tolerant

Typical tolerance to LoF variation

Missense Constraint?
0.05Z-score
OE missense 0.99 (0.931.07)
538 obs / 541.4 exp
Tolerant

Mild missense constraint

Observed / Expected Ratios?
LoF OE?0.43 (0.310.62)
00.351.4
Missense OE?0.99 (0.931.07)
00.61.4
Synonymous OE?1.08
01.21.6
LoF obs/exp: 22 / 50.9Missense obs/exp: 538 / 541.4Syn Z: -0.96

ClinVar Variant Classifications

0 submitted variants in ClinVar

Protein Context — Lollipop Plot

AARS1 · protein map & ClinVar variants

Showing all ClinVar variants across the protein. Search a specific variant to highlight its position.

Clinical Trials

Active and recruiting trials from ClinicalTrials.gov

No active trials found for this gene.

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